Prototype 01
In use 100% mappedResearch Agent Suite
A multi-server system using agent cores, note structuring, and citation logging. Handles document generation, entity discovery, and outreach strategy through specialized sub-agents with API-based scheduling.
Core Implementation
4 MCP servers · 24 tools · research-agent-mcps monorepo
research-agent-mcp
6 toolsMulti-source research pipeline: clarify, search, evaluate, extract, synthesize, report
research-notes-mcp
5 toolsNote structuring: parse, cluster themes, find contradictions, extract questions, generate output
research-log-mcp
7 toolsCitation logging: create entries, track searches, evaluate sources, format references (APA/MLA/Chicago/IEEE)
evaluation-mcp (Evalla)
6 toolsQuality scoring: custom rubrics, batch scoring, rankings, verdicts with reasoning
Supporting Systems
8 additional projects composing the full research infrastructure
intelligence-engine
Entity Discovery
AST parsing across 8 languages, KuzuDB knowledge graphs, hybrid search (BM25 + semantic + graph expansion). 53,000+ entities indexed across 272 projects.
SPINE
Orchestration Framework
7 pluggable executors (SubagentExecutor, MCPOrchestratorExecutor, ContentPipelineExecutor, SmallLLMExecutor, TaskTypeRouter). Context stacks, OODA loops, 8-tier memory architecture.
gen-loop-mcp
Async Scheduling
Task scheduling with retry backoff, expiry, and 12+ notification channels (Slack, Telegram, Discord, email, Teams, Google Chat, ntfy, Pushover, Matrix).
agent-comm-mcp
Agent Coordination
Inter-agent messaging with registry, cross-device relay (HMAC-signed), conversation threading, circuit breaker, and idempotency.
showcase-mcp
Document Generation
Extract highlights from source code, generate showcase sites, security scanning before publish.
manual-mcp
Documentation
Auto-generate multi-part project manuals from source code analysis with pluggable analyzers.
session-handover-mcp
Session Continuity
Git history capture, modified file tracking, multi-project workspace handovers with Minna Memory integration.
minna-memory
Persistent Memory
SQLite entity memory with relationships, full-text search, confidence decay, cross-session context, and conflict detection.
Architecture
Capability Coverage
| Claim | Implementation | Status |
|---|---|---|
| Multi-server system | 4 research MCP servers (24 tools) | Production |
| Agent cores | SPINE executors (7 types) + autoresearch-ext | Production |
| Note structuring | research-notes-mcp (5 tools: parse, cluster, contradictions, questions, output) | Production |
| Citation logging | research-log-mcp (7 tools, 4 citation formats) | Production |
| Document generation | showcase-mcp + manual-mcp | Production |
| Entity discovery | intelligence-engine (15 MCP tools, 272 indexed projects) | Production |
| Outreach strategy | agent-comm-mcp (18 tools, cross-device relay) | Production |
| Orchestration framework | SPINE (7 pluggable executors, context stacks, tiered memory) | Production |
| API scheduling | gen-loop-mcp (9 tools, multi-channel notifications) | Production |
Every claim in the prototype description maps to a production implementation. 12 projects compose the full system.
Project Deep Dives
Explore individual components in detail
Explore Live
Interactive showcases and documentation for the systems powering this prototype.
Intelligence Engine
AST-driven code knowledge graphs. 53,000+ entities, hybrid search, Cypher console.
MCP Server Checker
Protocol compliance validation. 50+ checks, 9 categories, actionable fix packs.
Security Audit MCP
5 integrated scanners (Gitleaks, Semgrep, Bandit, OSV, Syft). Docker-isolated.
SPINE Framework
7-tier memory, 7 executors, OODA composition. 11+ interactive demos.